Real-time Polymerase Chain Reaction:Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. factor with YRPW motif1 HEY1 GTTCGGCTCTAGGTTCCATGT CGTCGGCGCTTCTCAATTATTC Interferon regulatory factor 6 IRF6 GCTCTCTCCCAATGACCTGGA CCATGACGTCCAGCAGCTTGCTA Integrin subunit alfa 6 ITGA6 CGCTGGGATCTTGATGCTTGCT TGAGCATGGATCTCAGCCTTGTGA Integrin subunit beta 1 ITGB1 GACGCCGCGCGGAAAAGATG ACCACCCACAATTTGGCCCTGC Involucrin IVL TCCTCCAGTCAATACCCATC CAGCAGTCATGTGCTTTTCCT Notch Receptor 1 NOTCH1 TCCACCAGTTTGAATGGTCA AGCTCATCATCTGGGACAGG Notch Receptor 2 NOTCH2 GATCACCCGAATGGCTATGAAT GGGGTCACAGTTGTCAATGTT Notch Receptor 3 NOTCH3 TGGCGACCTCACTTACGACT CACTGGCAGTTATAGGTGTTGAC Notch Receptor 4 NOTCH4 TGTGAACGTGATGTCAACGAG ACAGTCTGGGCCTATGAAACC NUMB, endocytic adaptor protein NUMB GGCATACAGAGGTTCCTACA TGCTCCTTTGACCGCTAC Periplakin PPL GCAGAGTGACCTGGCTCGGCT GCCGCATCCGCCTCTAGCAC TATA-box binding protein TBP GTGACCCAGCATCACTGTTTC GAGCATCTCCAGCACACTCT Transglutaminase 1 TGM1 GCACCACACAGACGAGTATGA GGTGATGCGATCAGAGGAT ..
Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. ..
TaqMan Assay:Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. factor with YRPW motif1 HEY1 GTTCGGCTCTAGGTTCCATGT CGTCGGCGCTTCTCAATTATTC Interferon regulatory factor 6 IRF6 GCTCTCTCCCAATGACCTGGA CCATGACGTCCAGCAGCTTGCTA Integrin subunit alfa 6 ITGA6 CGCTGGGATCTTGATGCTTGCT TGAGCATGGATCTCAGCCTTGTGA Integrin subunit beta 1 ITGB1 GACGCCGCGCGGAAAAGATG ACCACCCACAATTTGGCCCTGC Involucrin IVL TCCTCCAGTCAATACCCATC CAGCAGTCATGTGCTTTTCCT Notch Receptor 1 NOTCH1 TCCACCAGTTTGAATGGTCA AGCTCATCATCTGGGACAGG Notch Receptor 2 NOTCH2 GATCACCCGAATGGCTATGAAT GGGGTCACAGTTGTCAATGTT Notch Receptor 3 NOTCH3 TGGCGACCTCACTTACGACT CACTGGCAGTTATAGGTGTTGAC Notch Receptor 4 NOTCH4 TGTGAACGTGATGTCAACGAG ACAGTCTGGGCCTATGAAACC NUMB, endocytic adaptor protein NUMB GGCATACAGAGGTTCCTACA TGCTCCTTTGACCGCTAC Periplakin PPL GCAGAGTGACCTGGCTCGGCT GCCGCATCCGCCTCTAGCAC TATA-box binding protein TBP GTGACCCAGCATCACTGTTTC GAGCATCTCCAGCACACTCT Transglutaminase 1 TGM1 GCACCACACAGACGAGTATGA GGTGATGCGATCAGAGGAT ..
Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. ..
Binding Assay:Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. factor with YRPW motif1 HEY1 GTTCGGCTCTAGGTTCCATGT CGTCGGCGCTTCTCAATTATTC Interferon regulatory factor 6 IRF6 GCTCTCTCCCAATGACCTGGA CCATGACGTCCAGCAGCTTGCTA Integrin subunit alfa 6 ITGA6 CGCTGGGATCTTGATGCTTGCT TGAGCATGGATCTCAGCCTTGTGA Integrin subunit beta 1 ITGB1 GACGCCGCGCGGAAAAGATG ACCACCCACAATTTGGCCCTGC Involucrin IVL TCCTCCAGTCAATACCCATC CAGCAGTCATGTGCTTTTCCT Notch Receptor 1 NOTCH1 TCCACCAGTTTGAATGGTCA AGCTCATCATCTGGGACAGG Notch Receptor 2 NOTCH2 GATCACCCGAATGGCTATGAAT GGGGTCACAGTTGTCAATGTT Notch Receptor 3 NOTCH3 TGGCGACCTCACTTACGACT CACTGGCAGTTATAGGTGTTGAC Notch Receptor 4 NOTCH4 TGTGAACGTGATGTCAACGAG ACAGTCTGGGCCTATGAAACC NUMB, endocytic adaptor protein NUMB GGCATACAGAGGTTCCTACA TGCTCCTTTGACCGCTAC Periplakin PPL GCAGAGTGACCTGGCTCGGCT GCCGCATCCGCCTCTAGCAC TATA-box binding protein TBP GTGACCCAGCATCACTGTTTC GAGCATCTCCAGCACACTCT Transglutaminase 1 TGM1 GCACCACACAGACGAGTATGA GGTGATGCGATCAGAGGAT ..
Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. ..
SYBR Green Assay:Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. factor with YRPW motif1 HEY1 GTTCGGCTCTAGGTTCCATGT CGTCGGCGCTTCTCAATTATTC Interferon regulatory factor 6 IRF6 GCTCTCTCCCAATGACCTGGA CCATGACGTCCAGCAGCTTGCTA Integrin subunit alfa 6 ITGA6 CGCTGGGATCTTGATGCTTGCT TGAGCATGGATCTCAGCCTTGTGA Integrin subunit beta 1 ITGB1 GACGCCGCGCGGAAAAGATG ACCACCCACAATTTGGCCCTGC Involucrin IVL TCCTCCAGTCAATACCCATC CAGCAGTCATGTGCTTTTCCT Notch Receptor 1 NOTCH1 TCCACCAGTTTGAATGGTCA AGCTCATCATCTGGGACAGG Notch Receptor 2 NOTCH2 GATCACCCGAATGGCTATGAAT GGGGTCACAGTTGTCAATGTT Notch Receptor 3 NOTCH3 TGGCGACCTCACTTACGACT CACTGGCAGTTATAGGTGTTGAC Notch Receptor 4 NOTCH4 TGTGAACGTGATGTCAACGAG ACAGTCTGGGCCTATGAAACC NUMB, endocytic adaptor protein NUMB GGCATACAGAGGTTCCTACA TGCTCCTTTGACCGCTAC Periplakin PPL GCAGAGTGACCTGGCTCGGCT GCCGCATCCGCCTCTAGCAC TATA-box binding protein TBP GTGACCCAGCATCACTGTTTC GAGCATCTCCAGCACACTCT Transglutaminase 1 TGM1 GCACCACACAGACGAGTATGA GGTGATGCGATCAGAGGAT ..
Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. ..
Quantitative RT-PCR:Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. factor with YRPW motif1 HEY1 GTTCGGCTCTAGGTTCCATGT CGTCGGCGCTTCTCAATTATTC Interferon regulatory factor 6 IRF6 GCTCTCTCCCAATGACCTGGA CCATGACGTCCAGCAGCTTGCTA Integrin subunit alfa 6 ITGA6 CGCTGGGATCTTGATGCTTGCT TGAGCATGGATCTCAGCCTTGTGA Integrin subunit beta 1 ITGB1 GACGCCGCGCGGAAAAGATG ACCACCCACAATTTGGCCCTGC Involucrin IVL TCCTCCAGTCAATACCCATC CAGCAGTCATGTGCTTTTCCT Notch Receptor 1 NOTCH1 TCCACCAGTTTGAATGGTCA AGCTCATCATCTGGGACAGG Notch Receptor 2 NOTCH2 GATCACCCGAATGGCTATGAAT GGGGTCACAGTTGTCAATGTT Notch Receptor 3 NOTCH3 TGGCGACCTCACTTACGACT CACTGGCAGTTATAGGTGTTGAC Notch Receptor 4 NOTCH4 TGTGAACGTGATGTCAACGAG ACAGTCTGGGCCTATGAAACC NUMB, endocytic adaptor protein NUMB GGCATACAGAGGTTCCTACA TGCTCCTTTGACCGCTAC Periplakin PPL GCAGAGTGACCTGGCTCGGCT GCCGCATCCGCCTCTAGCAC TATA-box binding protein TBP GTGACCCAGCATCACTGTTTC GAGCATCTCCAGCACACTCT Transglutaminase 1 TGM1 GCACCACACAGACGAGTATGA GGTGATGCGATCAGAGGAT ..
Article Title: Single-cell RNA sequencing of human epidermis identifies Lunatic fringe as a novel regulator of the stem cell compartment
Article Snippet: .. Supplemental Table 1 - TaqMan probes used for the qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol TaqMan Assay ID Delta-Like Ligand 1 DLL1 Hs.379912_m1 Glyceraldehyde-3-phosphate dehydrogenase GAPDH Hs02758991_g1 Hes family bHLH transcription factor 1 HES1 Hs00172878_m1 Hes family bHLH transcription factor 2 HES2 Hs01021800_g1 Hes family bHLH transcription factor 4 HES4 Hs00970270_g1 Hes family bHLH transcription factor 5 HES5 Hs01387463_g1 Hes family bHLH transcription factor 6 HES6 Hs05043218_s1 Hes family bHLH transcription factor 7 HES7 Hs00261517_m1 Hes related family bHLH transcription factor with YRPW motif 1 HEY1 Hs01114113_m1 Interferon regulatory factor 6 IRF6 Hs01062178_m1 Involucrin IVL Hs00846307_s1 Jagged 1 JAG1 Hs01070032_m1 Jagged 2 JAG2 Hs00171432_m1 Lunatic Fringe LFNG Hs00385436_g1 Manic Fringe MFNG Hs00159117_m1 Radical Fringe RFNG Hs01357010_g1 Ribossomal protein S18 RPS18 Hs01375212_g1 TATA-box binding protein TBP Hs00427620_m1 Tumor protein p63 TP63 Hs00978340_m1 Hes related family bHLH transcription factor with YRPW motif 2 HEY2 Hs01012057_m1 Hes related family bHLH transcription factor with YRPW motif-like HEYL Hs01113778_m1 Supplemental Table 2 - Primer pairs used in SYBR green RT qPCR reactions (related to Experimental Procedures) Gene Name Gene Symbol Primer Forward Primer Reverse Hes family bHLH transcription factor 1 HES1 AAAAATTCCTCGTCCCCGGT ATGCCGCGAGCTATCTTTCT Ribossomal protein S18 18sRNA GCAATTATTCCCCATGAACG GGCCTCACTAAACCATCCAA DeltaNp63 - p63 isoform dNtp63 TCCTCAGGGAGCTGTTATCC TGACTAGGAGGGGCAATCTG Dual Specificity Phosphatase 6 DUSP6 ACCTGGAAGGTGGCTTCAGT CTCGGTCAAGGTCAGACTCG Hes related family bHLH transc. ..
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